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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88772569, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTNSKLAKS VKLACAFGAA STIGFTGAVN AQETEEAADA VEKIEVTGSR IRRTDIEGAN  60
   61 PVTVMSRVDI EKFGITSIGD VLQAIPSAGS AINTNNNNGG NGTTTINIRG IGSNRTLVLV 120
  121 NGKRWAPGLT GSVDLNNIPA SIIERIEVLK DGASAVYGSD AVAGVVNIIT RQDFEGVHAS 180
  181 GYIGQYDEGD GNKEQWDIGF GTSNDKGNVY FNISYVEEEP TLAGDREISA VPTFGTPEGF 240
  241 GGSSAPPQGR FWTFDQADNG FNEQGDGNGG LEPWVEPDSR FNFAPFNYLS TPQERTNIYT 300
  301 QARYELTDNL SVNVTGFYGN RKSEQALAPT PLFIGTAFGD TGFTLSADNP FSPYDFDVTT 360
  361 DQDVLDADPN AREMFLFGRR MMEAGFRSFK QNVDQFQFNG GFEGVIEFAD REFFWDANYT 420
  421 YADITQNTST DGLLNMDRVA QAIGDPANCT GECTPLNLFG GAPNVIGEGT ITQEMLDYIT 480
  481 FTAQDELNSS LESYSANISG ELLELPAGYL AFASGYEKRW QSGYDQPDAI IAAGITSGNA 540
  541 RQPTSGAFSV EEVYLELAVP LLSDMPGVEQ LDLELATRYS DYSNFGDTTN SKIGLKWRIN 600
  601 DDLLVRGTWS EAFRAPSLDE LFSGNSDSFA PLTDPCNGGA AGNPELPGCA GIPASYEQPN 660
  661 TQIRTTVGGN ANLEAEEAES FTYGFVYSPE AVEGLSITFD IFDIEVDNAV SSVGAQTILN 720
  721 ACAQTGVNLC SLIERGAGGN VVDLFNGQVN LGGQTTSGFD YNVAYNFETE YGDFRVNWDG 780
  781 TYVDERTTIV VDPVTNTSTE FNDAGLAGDR DVVPRLRTNL AVTWAYDDWT ANWLVRFIGH 840
  841 TTEECSIDGD TLDQQLCSDP SDELGGDSFN ELEDMAYHDV SLGYAVNDNL RITLGVNNLF 900
  901 DTDPEVSYST FANSFDPSMY EIPGQFFYSR VNLNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle