YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|196111589, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTILVTGG AGFIGSAVVR HLINDTDHTV VNLDKLTYAG NLESLTPVSS SDRYSFEQVD  60
   61 ICDAEKVKRV FNTHRPDIIM HLAAESHVDR SIDGPGEFIQ TNVVGTYTLL EQARAYWSEL 120
  121 EGDKKAGFKF HHISTDEVYG DLPHPDEVEP GTELPLFTET TPYAPSSPYS ASKASSDQLV 180
  181 RSWLRTYKLP TLVTNCSNNY GPYHFPEKLI PLVILNALAG KPLPVYGKGN QIRDWLYVED 240
  241 HARALVVVAL NGEIGETYNI GGHNEKQNIE VVQTICTILD EVKPKESKYA EQITYVQDRP 300
  301 GHDMRYAIDA SKIERELGWK PQETFESGIR KTVEWYLANE GWWKAVLDGS YQGERLGTGS 360
  361

Type	Start	End	Confidence
Signal Peptide	1	17	0.72
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	360	0.99