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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88774428, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTIKALVIG GVAGGIMTAL AFTFLIPSSS STANNEQNEE KQPLYWVAPM DPNYRRDEPG  60
   61 KSPMGMDLIP VYEESSSGDA GPGTITIAPN VENNLGVRTA KVQRRALHVP IRTVGYVQYN 120
  121 EETLIHVHPR VEGWIETLHV KASGEYVKKG EPLYSLYSPE LVNAQEELLL AMRRNNKDLI 180
  181 VAARSRLNAL QVPEDVVETL TKTKNVQQTV TFSAPQTGFV DNLNIREGFF IKPGVTVMSI 240
  241 GALDEVWVDA EVFERQTAQI VEGLPVTMTL DFLPGKTWQG VVDYVYPTLE QSTRTLRVRL 300
  301 RFANQDYTLK PNMFAQVTIH SDMDSTNLIV PTEAVIRTGN QNRVVLALGD GKFKSVAIKI 360
  361 GRVVDEFTEV LEGLIDGDSI VTSAQFMLDS ESSISSDFKR MEPPEESPTS VFTEVMITDV 420
  421 MPSHNMITAK HGPIPEWDWP PMTMDFVVAE HINLATVKGG SSAHIEISKQ TDGQYVVTTV 480
  481 HIIDSAQSTQ ATMSESVWTE VKINSVMDGH RMINVDHPAI KEWDWPAMTM DFNVADNITL 540
  541 SDLASGTLAH IEISKSSSGE YLVSTIHVVE EASSETSTAV DAVWTQATVN AVMSASNQLS 600
  601 LEHDPIEAWD WPAMTMDFNV ANEVDLSDIT AGMRLHIEIT KTQDGAYVIT TVHIQASDKG 660
  661 TMDHSQHEGA HE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle