YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|196158756, gi...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASIFKRKA DAKTPLTRSF FKPALDKSSN LPYAPRYQTG LTLLEVMVAL LIFALTGTAV  60
   61 LKAAGEHLSS VGQIESVTFA NWVASNRLNQ LQLDTTWPPK NNLKGTMEMA DRTWYWQQTV 120
  121 TKTNDNDLRS VTVSVGEDES YDSSVTSVTT FVAKPTAGN

Type	Start	End	Confidence
Cytoplasmic	1	40	0.38
Transmembrane Helix	41	64	0.56
Non-Cytoplasmic	65	159	0.73