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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108881172, gi...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAQTEPEVP PAPISDEPFL GPLDIILLAV LIGGAAWYFL KSKKKDTQTS QFKSYSIQPT  60
   61 TVNTMTMAEN SFIKKLKSSG RRLVVFYGSQ TGTAEEFAGR LAKEGLRYQM KGMVADPEEC 120
  121 DMEELLSLKD IDKSLAVFCL ATYGEGDPTD NCMEFYDWIQ NNDVDFSGLN YAVFGLGNKT 180
  181 YEHYNKVGIY VDKRLEELGA NRVFELGLGD DDANIEDDFI TWKDKFWPAV CDHFGIESSG 240
  241 EEVLMRQYRL LEQPETPTER LYTGEVARLH SLQTQRPPFD AKNPFLAPIK VNRELHKAGG 300
  301 RSCMHIEFDI EGSKMRYEAG DHLAMYPVND QDLVLRLGKL CNADLDTIFS LINTDTDSSK 360
  361 KHPFPCPTTY RTALTHYLEI TALPRTHILK ELAEYCSEEK DKEFLRFMCS TNPEGKAKYQ 420
  421 EWVQDSCRNI VHVLEDLPSC RPPIDHICEL LPRLQPRYYS ISSSSKLYPT TVHVTAVLVK 480
  481 YETKTGRVNH GVATTFLSQK HPLDGEPLPR VPIFIRKSQF RLPAKTETPV IMVGPGTGLA 540
  541 PFRGFIQERD FNKKDGKEVG QTILYFGCRK RSEDYIYEEE LEDYVQRGIM KLRTAFSRDQ 600
  601 AHKVYVTHLL EEDMDLLWNV IGENKGHFYI CGDAKNMATD VRNILLKVLQ TKGSMSESEA 660
  661 IQYIKKMEAQ KRYSADVWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle