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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108880415, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIPGIPFVK LVPLLGGSAL KAAPAVTAVT ATVAAAVKTA TTIIGVGKLA IIPILIASLA  60
   61 YYNYDLFDPE NRPFNVKEVD REYDFIVVGA GSAGAVVASR LSEIGNWKVL LLEAGGHETE 120
  121 ISDVPILSLY LHKSKLDWKY RTQPQKTACQ AMKDNRCCWT RGKVLGGSSV LNTMLYIRGN 180
  181 KRDFDLWHAL GNPGWSYEEV LPYFRKSEDQ RNPYLARNKR QHATGGLMQI QDAPYLTPLG 240
  241 VSFLQAGEEM GYDIVDVNGE QQTGFAFFQF TMRRGTRCSS SKAFLRPVRN RKNLHVGLFC 300
  301 HVTKVIMDPD NKRALGVEFI RDGKKHEVYA TREVILSAGA IGSPHIMMLS GIGPRENLEQ 360
  361 VGVPVIHELP GVGQNLQDHI AVGGLVFRVD QPISVIMNRL VNLNSAIRYA VTEDGPLTSS 420
  421 IGLEAVGFIN TKYANQTDDW PDIEFMLTSA STPSDGGDQI KKAHGLKDEF YEHMFSEINN 480
  481 QDVFGVFPMM LRPKSRGFIR LQSKNPLRYP LLYHNYLTHP DDVGVLREGV KAAIAFGETQ 540
  541 AMKRFGARFH SKQVPNCNHL PEFTDEYWDC AIRQYTMTIY HMSGTTKMGP REDPFAVVDN 600
  601 KLRVHGIKGL RVIDASIMPR ITSGNINAPV VMIGEKGADL IKELWLQRGY YSRRGKRERD 660
  661 PLANVTTTEP SKTNETTTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle