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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157104158, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVLLTAVF IALHFATGLA NPDSKRLYDD LLSNYNRLIR PVGNNSDRLT VKMGLRLSQL  60
   61 IDVNLKNQIM TTNVWVEQEW NDYKLKWNPD DYGGVDQLHV PSEHIWLPDI VLYNNADGNY 120
  121 EVTIMTKAIL HHTGKVVWKP PAIYKSFCEI DVEYFPFDEQ TCFMKFGSWT YDGYLVDLRH 180
  181 LQQTPDSDNI DVGIDLQDYY ISVEWDIMKV PAVRNEKFYS CCEEPYPDII FNITLRRKTL 240
  241 FYTVNLIIPC VGISFLSVLV FYLPSDSGEK ISLCISILLS LTVFFLLLAE IIPPTSLTVP 300
  301 LLGKYLLFTM MLVTLSVVVT IAVLNVNFRS PVTHKMAPWV HRVFIELLPR VLCIERPKKD 360
  361 DEPSENEEQA PEVLTDVFQV PPDVEKYVSY CGKEYTTDFD IPALPPSRFD VAASGGVGPC 420
  421 FGEPPLPALP LPGGDDDLFS PTSNGDMSPN CCGDVSPTFE KPLLREMEKT IEASRFVAQH 480
  481 VRNKDKFESI EEDWKYVALV LDRLFLWIFT IACVMGTALI ILQAPSLYDN TQPIDAMYSK 540
  541 IAKKKMELLK MGTSKRVCWL FQWWTPCLPE TQHLPRHGVS QIKTEETALT VAVDLVACPD 600
  601 RSFERKKGFL VRFCFCQLLN STPRRNGHAI VVICSPAVCY TAEERILGGT HHVSQQRYVL 660
  661 LIVRFMFSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle