YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157104550, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVPRVTL NNGKSIPILG LGTWGSPPGE VAQAVKDAID VGYRHIDGAH VYQNEHEVGE  60
   61 GVNAKIAEGV VKREDLFITS KLWNTFHRPD LVEGACRTTL KNLGLEYVDL YLIHWPMAYK 120
  121 EDGELFPADA DGKTAYSDVD YLDTWKEMEK LVELGLAKSI GISNFNSKQV ERVLAIAKIK 180
  181 PVTNQVECHP YLAQTKLSAF CASRDIVITA YSPLGSPNRP WAKPEDPQLM EDPKIVAIAK 240
  241 KYNKTSAQIL IRYQIQRGHV VIPKSVTKSR IQSNFEVFDF ELTEDDMKLI TSFDCNGRLV 300
  301 PITSAAGHPY HPFEKEEF

Type	Start	End	Confidence
Signal Peptide	1	34	0.73
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	318	0.99