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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157105058, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNQTVDKGCD ERCACEADGK WRCEPRCARP FIKRGKTLPD AAGCYESPSK TDECCATLVC  60
   61 PSERLTDGRY CSIHYAIGID HTDESTDRIQ TTSTAIVTSC IYRNQSYDVN AKVEMGCDKI 120
  121 CTCTSEGELD CAPRCPPMNE TRSEHCVTVP DPNDACCNRE FCDVILDDHE QSAGMMMMSP 180
  181 STAAPAPSTT AGHEFSGEID QCEYKGKMYT KNQQFHDECN SLCLCTDAGV HCAKIECPSH 240
  241 FGLDVLDPHC LRWEPEPATF RAIAPRCCPE RMRCIDNGTC VFKGHNFDNW SEIPSNLTGC 300
  301 DQHCYCESGK VECRPACPPV PATPPPNLPC NPRMARLAPL PDDDCCKHWT CSGGEPAISG 360
  361 MFLLIAICIT HFCLQLSFFH YTWNDVLKPL LMPDTINQFL PTKTPKSEKG EKTKPEKESE 420
  421 TPKDVLPNVP FYPTVDGKPP KVPQEKPHKK HPKEDSKKDH FNNIYPSGET SGPGDYGQYG 480
  481 DVQKPATLGV QRPGPPGYYG PEIKPGYNDY NPYIHVNGPP GSVPLPPGGQ LPHHPLDKQI 540
  541 INALGGNAQN IPPNIRIEQL LQQIHAQDPN PGPILHGQNI PFQHPGAASG NGINYNQYGE 600
  601 PLDIGLVPHQ RPQSPPSPPT GFHFAHIILD STVNLIAVPI FQFMSFSKLF SKRSISVTKK 660
  661 NILTFSFSNN LNNAKRALYK LNPRPGLGFP SLQADLKVLA LDAIDPNTVR VIFIVPQVYV 720
  721 GLHGRVELRY TRTRNNDTST WQSQVFAPPD DLIATSQLEF ELPGLEPNTE YRVKITLVLR 780
  781 DVNSQPSSQI YNVRTPSDRV ITPPTLINTD LHYPHLGQPT NFLKEIIQDP VLQTNDVNAT 840
  841 WAKITWRKLD DEELDYVDGI QLRYKEIDGM VYDATPLIHR ALNEYTLENL KPQTRYEVGI 900
  901 FFIPFPGHGE EVRAGEMLQF TTAQRVDMYG FEVVVNVSKV KASSVEVSWS GVPYPEDKYI 960
  961 NIYRAIYQSD SGKEDSSVFK VAKRDSTTGT LIMDLKPGTR YRLWLEMYLT NGSIKKSNVV1020
 1021 NFITKPGGPA LPGKTGKLSV AGVDSAPGDY YGPLVVVAVI AALAVMSTLI LLLILTRRRV1080
 1081 QSATITPPRK NEVSYDNPSY KVEIQQETMS KY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle