YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88714194, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKLEEIDD YLDPHYIQRS NWLRAAVLGA NDGILSTASI AIGVAAASNI REPVILATLA  60
   61 GLVAGALSMA AGEYVSVSSQ TDVEKADIER EKQELKEMPE IELQRLAEIY EKRGLKKETA 120
  121 RKVAEELTEH DALGAHVRDE LGINEISQAK PMQAALASGG AFTVGGLLPF LVTLFLPLES 180
  181 MEYSLYGFAL FFLIILGALA AKAGGSGIGK AILRITFWGT VAMGLTALVG YLFNVNVG

Type	Start	End	Confidence
Cytoplasmic	1	26	0.89
Transmembrane Helix	27	47	0.88
Non-Cytoplasmic	48	53	0.79
Transmembrane Helix	54	75	0.87
Cytoplasmic	76	154	0.96
Transmembrane Helix	155	176	0.93
Non-Cytoplasmic	177	183	0.81
Transmembrane Helix	184	205	0.90
Cytoplasmic	206	214	0.77
Transmembrane Helix	215	233	0.97
Non-Cytoplasmic	234	238	0.77