YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157106474, gi...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.26
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNSTYMIT FGIVFIVVAV QMAYSIKCWE CRSDSDPKCA DPFDNSTLSI TDCRQVESKE  60
   61 HLPGVRATMC RKIRQKVHGE WRYFRSCAFM GEPGIGGDER FCVMRSGTYN IFMEYCTCNS 120
  121 KDGCNSAPQF TPTKWSVTII AVLSIMLYLF GIKCWECRSD LDPKCSDPFD NRSVPLSDCS 180
  181 RKSMIHLPSV KATLCRKVRQ KVNGEWRYIR SCAFIGEPGI GGDERYCLMR SGTYNIFVEY 240
  241 CTCNSKDGCN SGLERVPLIY LSVVSTFAFS TTTNIHGDAL QFVLNLLE

Type	Start	End	Confidence
Cytoplasmic	1	6	0.26
Transmembrane Helix	7	26	0.63
Non-Cytoplasmic	27	288	0.55