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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157110100, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVESEGVQP VSGTGNGHSA TITTIDTDDT HQELAARRRM FMSQPSTVAI RRQQAVCVRR  60
   61 AHKIYGTKKN PNVILDGLNM TVQKGSIYGL LGASGCGKTT LLSCIVGRRR LNSGEIWVLG 120
  121 GRPGSRGSGV PGPRIGYMPQ ELALYGEFTI RETLIYFGWI CGMTAEQVDE KTDFLLKLLQ 180
  181 LPNASRFVKN LSGGQMRRMS LAAALLHSPE LLILDEPTVG VDPVLRQSIW DHLVEIVKNG 240
  241 NTTVIITTHY IEETRQAHVI GLMRGGKFLA EESPAELLAQ YHAESLEDVF LKLSVMQNMG 300
  301 KRRRSSIAQE VVENIRVPAI SNPALDLSPE EDHGEISGEF GDNISMSSRG PDSITPEIQA 360
  361 PPLPPEEDTK APFIEYFKFV KPNHMRALIW KNFLWMWRNV GVMAFIIGLP VGQIILFCWA 420
  421 IGHDPVGLRV AVTNHELEMA NLSYAECPTY TGCNYTLLSC RYLENLKNRN VDVQMFETEQ 480
  481 EALNQVSRGK AWASMIFSHN YSEALVERSE NIRSVEEWTL DAASVAVSMD MSNQQIGNLL 540
  541 YRDIQYAYFS FIESILSDCD VNPSNGRLPI QWHKPIYGDV SPNFTDFAAP GVILTIIFFL 600
  601 SVALTSGAML IERNEGILER CLVSGITGVE ILFSHVTTQF LVMCGQTALV ILFSFYVFDL 660
  661 TIHGEIFWVV MLTILTGLCG MTFGFVVSCS CDNERSATYM AMGSFLPIVM LCGIIWPIEG 720
  721 MHPVVKIFSV FLPLTKSTES LRSILQRGWL IGNPNVWIGF ASTGIWIVIF LTISILLLKF 780
  781 KKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle