YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157111831, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNRVPNER KLYLCKWYFK VGFALLPFVW AINTVWFFSE AFRKPAYDEQ KEIRKYVIFS  60
   61 AIGSLIWFTL ILTWVMTFQL KRTEWGDFAD SISFIIPLGR A

Type	Start	End	Confidence
Cytoplasmic	1	16	0.72
Transmembrane Helix	17	38	0.89
Non-Cytoplasmic	39	55	0.70
Transmembrane Helix	56	78	0.90
Cytoplasmic	79	101	0.74