YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157113883, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELLIDPNI RGWVFLPIVV ITFLVGIIRH YFSILISSQK KVELTQIQDS QAMIRARLLR  60
   61 ENGKYLTPQS FAMRRHYFNN EETGYFKTQK RAPPSPNSTA MLSDMVKGNF INVLPMIVIG 120
  121 GWINWMFSGF VTTKVPFPLT LRFKPMLQRG IELASLDAAW VSSASWYFLN VFGLRSIYTL 180
  181 VLGENNAADQ TQTMQDQMSG AAVAMPQDPK AAFKAEWEAL EITEYQNALA NIETDMLMAA 240
  241 SGASDAVYHG REDGALKN

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.61
Transmembrane Helix	12	32	0.93
Cytoplasmic	33	109	0.63
Transmembrane Helix	110	131	0.82
Non-Cytoplasmic	132	152	0.63
Transmembrane Helix	153	174	0.51
Cytoplasmic	175	258	0.54