YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157114097, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKSINLTSE PNKMSATPRS SEDLLGESWI ELSSSTNTCP KSPDRTTPLP FTSVEEYLRL  60
   61 LREAQRESKE SSRVASLTSS RRDSPRGSPK SPPNSPNTEL ATTEEELRGV YINYLNREGA 120
  121 ATSAQKDTDW VWEWSSRPDQ LPPKDWKFEH PKQDVRRMQQ GYSMRLTRVG KNSLFSREVL 180
  181 YSLVLTNVLS LLLGAGIGAW LHKRGLLFTR ISIE

Type	Start	End	Confidence
Non-Cytoplasmic	1	178	0.53
Transmembrane Helix	179	202	0.88
Cytoplasmic	203	214	0.50