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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108874849, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTCPRGYKGK LCQEIQFCEL QKCPSNATCQ NLDTGYECIS NMTFHDDNEP LKFVFNAGND  60
   61 QQPYTKDTNM DTIEISYRTK FGGTLLYVQE SDMYFEISTI NKLVTISWKL TLDLPLNNRF 120
  121 EYDEDDNYGW HTIFIKVSNN GKLEAGWKGW ETMIDPQPPI SVDIDYLAYK HLFSGKHYIY 180
  181 LGGMPAMSHI ENNSIVNGGI DKGSTFKGCL GETRVGGYLL PYFPHDVIYP DTFQFTGPHF 240
  241 NLNSSQPEEG CILCFQQSCK NGGVCSNPSE KYACDCPAGY DSDDCSQNID ECLTANCTNN 300
  301 STCIDGVASF TCQCLEGYEG DLCEFEIDEC MSSPCRNGGS CTDLVAGFSC ECTEEYAGAQ 360
  361 CEVFRLVTCE NLPCKNGSIC IDGFNSTTGN NFTCSCKTGF SGALCDIPFC QLEECQNGAI 420
  421 CMTNDENVPV CRCIPGYTGR LCEIEIDECE SMPCFNGGRC IDFINDYKCN CTGTGFEGKN 480
  481 CEIDIDECYE LRINCGGRGS CINTRGSFKC QCDEGMCGKE CAQVDPCIQN PNVCQNGGEC 540
  541 IEDCDKEHRY YCNCTVGFTG INCSEQATLE AEGASGADIA LIVVPVVIGI LAIAGALIGA 600
  601 FLVTARNKRA TRGTYSPSAQ EYCNPRLEMD NVLKPPPEER LI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle