YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108874425, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTVIRMPN ASSGAARGGG GHFNEPRNRG IRIGCCRVCT CVNLEFFMSK NGILKIFEII  60
   61 LGSFCQTLLI QFGMDSAKDI GEAFHGFLTT VSACLTTTSI LLLCYAISAR TFHLVRQSIF 120
  121 EVMYNAISCF MYLSASSYMG FAVNVWLYPK FLLFKNTGGV HSAYPAMTAV YYMGTIVGIV 180
  181 YGLDAFVAFR YLKGYS

Type	Start	End	Confidence
Cytoplasmic	1	52	0.97
Transmembrane Helix	53	74	0.87
Non-Cytoplasmic	75	83	0.90
Transmembrane Helix	84	107	0.89
Cytoplasmic	108	121	0.87
Transmembrane Helix	122	147	0.81
Non-Cytoplasmic	148	167	0.89
Transmembrane Helix	168	189	0.90
Cytoplasmic	190	196	0.83