YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108874073, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKFVTFFA LVAVARAGVL APVGYSAPLG YAAPLATQNL IAAPLAKTVI SSPQYSFSYG  60
   61 VSDGLTGDQK SQQESRSGDV VQGSYSLVDS DGLKRTVDYT ADPINGFNAD VRREPLTVAA 120
  121 PVLAAKTLVA QPAYAAYASP VAKTIISQPA IASYAAPLAA KTIVSQPALA SYASPLVSNT 180
  181 IISQPALTSY AAAPLATKTI LSQPAYATSL ATKTIVSQPA LATYASPLAA KTLISQPAIA 240
  241 SYAGPLAAKT IVSQPAYASY AAPAYYN

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.98