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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108873963, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FLLYYRNPSW WRRRTALEKA LTLVSIVCGI AVVALLISLV SVLLSDRIQE PDNGSSQSPL  60
   61 ALTGSRRGKN MRVNSNDSKG TDNLCLTPGC IHSASKALDQ MDSSVEPCDD FYNYACGKFL 120
  121 KDTNIPDEKV SVNTFSVIGD RLQEQLRSLV SEDIHEEEAT PFKLAKNMYK LCMNKTRIEE 180
  181 KGIKPLLDIL DTLGGWPVLK GDSWNADSSW SWTKSVKDFR MQGYSTDYFF DFSVGTDLKN 240
  241 STRRIIDTDQ AALGISREYL VKGMDNAIVS AYYSYMVDMA VLLGADEERA KRELMDSLNF 300
  301 EIALANISLP NEKRRNATAL YNPMTVKEFQ HKYPYTDWVE YFNVILKDTG IVIDENEVII 360
  361 VSVPTFMEQL GPLLQNTPKR TMANYVMWRI SGFSSFFLTE NLRKRQLQYS TALSGKQEQE 420
  421 PRWKECVDIT SGSLPISVGA LYIRKYFKED SKRAALDMVN GIKSVFVDIL KKVEWMDEVT 480
  481 RKSALDKVDS MVTHIGYPDE LMDDNKIADY YKDLKFQPED NYLNTILYMN QFGTTKAFKK 540
  541 LRQAVNKTDW ITHSRPAVVN AFYSSIENSI QFPAGILQGQ FFSYERPKYM NYGAIGFVIG 600
  601 HEITHGFDDQ GRQFDKNGNL VDWWQSDTKK AYLEKARCII EQYGNYTEPN VKLNLNGINT 660
  661 QGENIADNGG IKEAYYAYKK WAEKNGPEPR LPGLDLSPEQ MFWLSAAQTW CSVYRPETMK 720
  721 MRITTGVHSP GQFRVLGPMS NMVEFSKDFN CPVGSPMNPA QKCEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle