YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ2_AEDAE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRKLTSNSS RWTTTHLGSL WQEVGGHPIR RGLILHHHCR PLAAVSSGVI LRQKEESRWS  60
   61 PNSGGKLANL RCWPEYRLHS ATKRRTLGEL VLRDYSSNNI SDKKPEPKSL LQSIVQNPYA 120
  121 RLMRIDRPIG SWLLFWPCGW SIALSAPAGC WPDLWTLTLF GAGAFIMRGA GCTINDMWDR 180
  181 DIDGKVARTR NRPLVAGELT SADAWFFLGA QLGVGLLILL ELNWYSIVLG ASSLGLVIIY 240
  241 PLMKRITHWP QLVLGMTFNW GALLGWSATQ GSVMWSACLP LYVAGVCWTI VYDTIYAHQD 300
  301 KVDDALLGIK STAIRFGDNT KLWLSGFSTA MIGGLVASGM VCEQTWPYYS AVGVISAHLA 360
  361 HQIYSLNIDN PTDCATKFIS NHQVGLILFL GIVLGTLYKG YSQRAGKSST TSSSSTSSSS 420
  421 SPSSGLLLAA TNHHQPARQA S

Type	Start	End	Confidence
Cytoplasmic	1	128	0.99
Transmembrane Helix	129	149	0.91
Non-Cytoplasmic	150	155	0.71
Transmembrane Helix	156	178	0.78
Cytoplasmic	179	193	0.86
Transmembrane Helix	194	218	0.77
Non-Cytoplasmic	219	223	0.62
Transmembrane Helix	224	242	0.90
Cytoplasmic	243	248	0.77
Transmembrane Helix	249	268	0.81
Non-Cytoplasmic	269	272	0.61
Transmembrane Helix	273	292	0.78
Cytoplasmic	293	321	0.72
Transmembrane Helix	322	341	0.91
Non-Cytoplasmic	342	378	0.72
Transmembrane Helix	379	401	0.82
Cytoplasmic	402	441	0.78