YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108872270, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNHWPSSHS ILITVSIVFL FLLLEETWAL KCRTEDGPSS DEIRKVIRVC MKRITSESEN  60
   61 KSNNEYENYD SSYSDSNSDE DRESSTEGNT RRQTNGGNQS TNTRGRNGED MSRGRDSSRS 120
  121 SDDRSRGDNR NRQDNGRRRD RERDYDYGPM GRRMDDGRNQ QGRYKRQYYN DGAQGGYGYN 180
  181 YQQNDRYNRD RNQFMHPNGN TSSNGTNNTE RDRACMMQCF FQEMKMTNNE GFPDKHKVLH 240
  241 VVTKDLRDYE LRDFYTDSIQ ECFHMISMDN KLKDKCDYSM KFVTCLADRG QANCNDWENE 300
  301 AIMF

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	304	0.98