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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108871352, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRRFFSPP LVVLAVCWAS SSSSAYRNVQ PEATTFLRDS VESIPPHVYE KTAAYTVDDV  60
   61 FGTKSLPLRN AVESAPVNLV DERLPLRDAV EFRIVDMDNA IEDVVSEVKS VITSEQQRVE 120
  121 SAETIDYRAP QSPIFQNKYA AYSFPMQYDT KNPQPFRYGS PYQQLVDINT LKQLPTLEYN 180
  181 QYNQYEKLQK VESLKQSSGD YKVICHITNW AFYRKNDAQF VPEHIDNKLC THIIYSFATL 240
  241 DPLSLMMKEF DSWADIENNL YARTISSSGS VPVLLGIGGW TDSVGNKYSS MVGSPTNRRN 300
  301 FISNAIVFLK THGFSGLHFD WNYPVCWQSD CSKGSSSDRP NLSKLMMEMQ REFSRENLLV 360
  361 TMSISGYKEV ITEAYELAQL SNVVDFMTVM TYDYHGSWET QTGHVSPLYG NAGDKYPQYN 420
  421 VDYTMQLLTK MGARREKLIM GVPMYGQTFM LTRSRDKSEI PGIGTQASGP GNAGEDTRQP 480
  481 GMLAYYEVCH RVRKQKWSVG RDSSMSGPYA TWKDQWVGYD DPVSATAKAR YVMKSGYGGI 540
  541 AAWTIDLDDF QNKCCEERYP VLSAINRALG RLKTPQPTVI DCSRPVQPVT PPPAEMTVSV 600
  601 DTGGGGIATT SATTWPSWQE PTTSRMTTTT TTRRTTTTTT TTTEMPTTTT TRRTTRSTTT 660
  661 RRPTTTTTTY APPPTTVGTT IPAPGLVQPE LTEGEPCEPN QYKAHPYSCN SYYRCVYGEF 720
  721 KQQFCAGGLH WNEVANLCDW PASAKCAKDT AGPPPVAALP TTTTMAPATT TRRRTTTTAY 780
  781 TTQSPWWWTT ASHVETTPPK ATRPSKKPVT TTKKPVQRPV DKCINGEYYP HKSCDSFYIC 840
  841 VNEKKIAQQC GPGLFWNEEE KSCDWEDNVN CVSRAQYYKL LTKNSKLAAL KVLSEDDPCD 900
  901 GHTHVPYPGD CSQYLICNWG RLEAASCADG LHWNQIRMIC DWPANAKCTQ LASTENSSEE 960
  961 GSESVVEEGQ DIDGPYNKPS TTTTTTTTTT TTTPVPILEP LSGYYKMVCY FTNWAWYRKG1020
 1021 YGKYTPDHIR TDLCTHIVYG FAVLDYSSLT IKTHDSWADI DNNFYTRVVE AKNKGVKVTL1080
 1081 AIGGWNDSAG DKYSRLVRSA AARAKFIEHV IGFLEKYGFD GLDLDWEYPV CWQVDCKKGF1140
 1141 ADEKEGFASL VRELSAAFKP RGWLLSAAVS PSKTVIDAGY DIPTLSRYFD WIAVMTYDFH1200
 1201 GQWDKKTGHV APLYYHPEDE IDFFNANYSI NYWIELGAPS RKLVMGMPLY GQSFTLADQK1260
 1261 NNGLNAKAPG AGQAGEFTRA AGFLAYYEIC DRIQNKGWTV VQDDLKRMGP YAYKGNQWVS1320
 1321 FDDKEALLRK VQFIRAMNLG GGMIWALDLD DFKNRCGHGH HPLLTAIREG LKDAPNGVET1380
 1381 ILAEPSKEDE NHETIGTNSV ETHPGNLEVS AEVINKETSN QDENAIESDV DYKVVCYFTN1440
 1441 WAWYRQGNGK YLPEDIDADL CTHIVYGFAV LDRDRLVIKP HDSWADIDNR FYERVVEYKK1500
 1501 KGKKVTVAIG GWNDSAGDKY SRLVRSAAAR QKFIADVVAF IEKYGFDGLD LDWEYPVCWQ1560
 1561 VDCKKGFSDE KEGFASLVVE LSQAFKPKGL LLSSAVSPSK KVVDEGYDVV TLSDYMDWIA1620
 1621 VMAYDYHGQW DKKTGHVAPM YEHPDDFDKT FNANFTIHYW IEKGADPRKL VMGMPMYGQS1680
 1681 FSLADNKEHG LNAKTYGGGE AGESTRARGF LSYYEICANI RNKKWTVARD RKGRMGPYAY1740
 1741 KGDQWVSFDD QYMIRHKSEY VKAMGLGGAM IWALDLDDFR NLCDCEEYPL LRTINRVLRN1800
 1801 YPGPGPRCVL EKEPQREEPR PTRPPTSTTP ETTRRPSTTT STRRTTMTTT TTTTRRPTTT1860
 1861 TRRRTSARPT YTTTNVPSYQ EIANEVDEPT CTDGRLFVPH PTDCNKYYIC QYGKLYEQKC1920
 1921 PGGLYWSVDH CDWPQSTNCR NKQTDTVTTT KKPSYPSTQR TTTTTRPPKR TTVRTTTAWK1980
 1981 PESTTSWWSP ESSSMVWWSP DTTSKRPTRP PLEHTDVQTT GNNDFKVVCY FTNWAWYRQG2040
 2041 DGKYTPDDID SNLCTHIVYG FAVLDRESLT IKTHDSWADI DNQFYERVVE HKRKGTKVTL2100
 2101 ALGGWNDSLG DKYSKLVRSS SARRAFVKHA VEFIEKYNFD GLDLDWEYPV CWQVDCKKGF2160
 2161 PDEKEGFAEL VKELAIEFRP RKWLLSAAVS PSKMVIDAGY DVPVLAEYFD WIAVMTYDFH2220
 2221 GHWDKQTGHV APLYYYPGDT YDYFNANFSI NYWIEKGAPS RKLVMGMPLY GQSFSLADSG2280
 2281 KNGLNDKSYG PGEAGQFTRA GGFLAFYEIC EKVNQNGWAV YRDSEGRIGP YALRGNQWVS2340
 2341 YDDVDEIRRK SQFVKKMNLG GGMIWALDLD DFRGRCGCGR HPLLKTMNQE LGRITTKRPE2400
 2401 NCT

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