YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108870276, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHNHGGPDD MEMLCPMKMS FHGGTCEVIL FPSWATTKTG QFVGAWIGFF LMALLYEGLK  60
   61 FYREILAQKE AEKHCSPGTK RSMRHFMTDK LHILQSLLHL IQVSVSYILM LIVMLFNLWL 120
  121 CLAIVSGAAV GYYFFGWIRR SKMDPNECCN

Type	Start	End	Confidence
Non-Cytoplasmic	1	41	0.48
Transmembrane Helix	42	59	0.88
Cytoplasmic	60	90	0.88
Transmembrane Helix	91	111	0.85
Non-Cytoplasmic	112	115	0.67
Transmembrane Helix	116	136	0.92
Cytoplasmic	137	150	0.90