YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108870123, gi...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.20
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVALTGGI ATGKSTVSKV FRQNGVPVID ADAIARLVVE PGKPAWHKIK AAFGDGVFHS  60
   61 DSGELNRDAL GKLIFDSVEK RRILNEITHP AIHRIIYKEV VKFFFLGHNF VVLDLPLLFE 120
  121 TGVMINLMHK IITVTCEEDI QLTRLMDRNH LSEADAKKRI KQQMPLEQKC NQSHFVVENS 180
  181 GTLQDTEDQA MKILNVLQDS NQHWKIRGVI FATATILLSS IAWVLNYKYK FLSSN

Type	Start	End	Confidence
Cytoplasmic	1	103	0.56
Transmembrane Helix	104	118	0.20
Non-Cytoplasmic	119	205	0.61
Transmembrane Helix	206	227	0.84
Cytoplasmic	228	235	0.52