YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108869989, gi...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYYCDYCD TYLTHDSPSV RKTHCTGRKH KDNVKFYYQK WMEEQAQHLI DATTAAFKAG  60
   61 KIAQNPFSAG PPKPNVAIPP PSMGMPARPG MIPGMPAGAP PLLMGPGPMG MRPPMMMPMG 120
  121 MPPMGMGMRP PMMNGPPPQM NQKV

Type	Start	End	Confidence
Cytoplasmic	1	89	0.59
Transmembrane Helix	90	111	0.52
Non-Cytoplasmic	112	144	0.71