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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157138665, gi...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCILKMDSQ KPEDGPYRGK YIGKFNSYHH QASGDVYAVD EYTFLLTGFN YDGNGVDTFF  60
   61 WSGASNRPGP QGFIVPDEFG KTNILERYFN KDFTLRLPDN KKITEVKWLA IYDLNSQNNF 120
  121 ADVYIPEDFE PPVPQKAGSL SRNSHGVSSE AIDILDSKTI RIPEFSYDGK GKEVHFWVGV 180
  181 GPSPSSKGRK IPDEMGYLDP IRAYDRETIT LELPGDMTIF DIDWFSVYDV ETKEDFGSIL 240
  241 ISDDLNVPPS LVKITPHIES LPNCRQLHKD YRVSWEVFGP QITLQLAGNV KEDEYMAFGI 300
  301 SGADDKSQMQ GADVAVAYIE GHQGYAVDYN ITSLAPCVQV LGQNKGVCRD DVVGGQDSYQ 360
  361 LHTFNRENGI NTITFRRMLI SPDNGDKTFV LDRSMYMIWA MGRLDSNNEP TYHDIYPKKD 420
  421 IVISFNTSEP VNDCFSFTRS EVNLKDVWEK AQIFDRTIRS FTATLGPAGG KRGYQGITGH 480
  481 VSNGLAWYIN GLLVPELWLR RGLTYSFKVR GGNNPHSPEF YHPLVITDEP RGGFDRLSDA 540
  541 KQSEIRVLAG VEFTRRGRPK PTAAGPRCLA EHPPNQDRRL DDNFATFKKF NRTLRWSCEK 600
  601 GDPAILEITP NSSWPDVVYY NSFTHANMGW KIHIIDSYSS SARNGAGAAP WVEIRLMVGI 660
  661 VAATATLLMG GLVSGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle