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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157103809, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSVLVVLL ALGFLEVTVT GNDNHQATFG GSGGENKFLR YLFNKYGSKG VISFEGLEHL  60
   61 MHSLGLGGLD FTPSHTLDEH RPDGFKTSDI VNSFTADYSE NDLQQQEKVT VSINSISEDH 120
  121 ARSSHQNDVL PPSTEYPERN RRAESHHYHH HPQEAEQDII SSSDQIKHFN ELTPEVNNTK 180
  181 ENSTSSATDQ ADVSSSGNWH NEIWQEIIFK EIHDPLHRHP RRDDRRKSCL SPMSMVHLIL 240
  241 EEPQNSDEVL HQNFNYGHLG PLDARHRRSI PHAHPHDATD HELEVEEILA ARIKITPATF 300
  301 KDLCPALLAQ IDQRACMEKY QSKDLPHVEK KLFNYAWLYA TVCVFIISIC GLAGVAIVPL 360
  361 AKSVAYDEIL RFLVALAVGT LCGDALMHLL PHALIPHEKR PMVEDDHGPS DDHSHGQEPV 420
  421 WLCCCAFLSA LFMYTLETIL PMLRSDDDSG HHGHSHARSK VAPVPEPSQM RRNTNSVDDI 480
  481 ELDLQDRQRK ELNSMLEKKP KQNKPLSPVA FMVILGDGLH NITDGLAIGA AFAADPVTGM 540
  541 ATSFAILCHE LPHELGDFAL LLQTGVSIKR AMFLNVVSSI LSFIGMLIGL LVTGLHESVV 600
  601 RWIYAGTAGT FLYIALADLV PEMNRDLSET FSSDQRCKKL RTTWTQICGI FLGGMIMLVI 660
  661 ALNEDHLRVL FE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle