YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157109753, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKFLTFCA LVAVARAGVI APAAVAYTAP IAKTVAYAAP AAHVAYAAPA AHVAYAAPVA  60
   61 KTIVAAPVAK TVVAADEYDP HPEYSYSYGI SDALTGDQKS QQESRHGDAV QGSYSLVDAD 120
  121 GFKRTVEYTA DPVNGFNAVV HREPLVKTVA AAPVAKVVAA APVAYAAPVA KTISYAAPAV 180
  181 TKTIVSAPAV TKTIVSQPAV AYAAPAYAYH H

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	211	0.99