YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|107102647
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQRGFTLL ELLIAIAIFA LLALATYRMF DSVMQTDQAT RVQEQRMREL VRAMGALERD  60
   61 LTQAVERPVR DELGDNRGAF LSEGENDQIV EFTRGGWRNP LGQARSRLQR VRWSLSGETL 120
  121 ERRYWLVLDR AQDSKPRVQQ VLDGVTALSW RFLDKEHNWQ GHWPTDEGSE EERLESLPLA 180
  181 VEMTLEHRHY GKLVRVWRLL DPPLKQDQPQ GQPGGENSEN GEGGVPQPPE GMPGAPE

Type	Start	End	Confidence
Signal Peptide	1	25	0.82
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	237	0.99