YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|107099928
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKAWPGACY WNDSMNRISL AALLSCLPLV AWADNPVKLD TPVSGWRAGD GSAANYRQVV  60
   61 NYPASSVNVA ADQATTARIR GAIESQPKER PATLVVNGVS MPLKVDADGS FDRPFAFPSG 120
  121 SNSVEVRNAA GQSRRVQFYH GGGGGEVPAK LRVLLSWDSD NTDLDLHLVT PDGDHVWYGN 180
  181 RSLANGATLD VDVTTGYGPE IIATPTPQKG PYLVYVNYFG GGYGSSEDGA EQAAQNLTTA 240
  241 RITLVTEEGT PNEKQETFLV PMRKPGELTL VKRFSYP

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	277	0.99