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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|107099783
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVLHQIGK TSLAAALSGA VLLSAQTTHA AALSVSQQPL MLIQGVAPNM LVTLDDSGSM  60
   61 AYAYAPDSLV NSRNNVYFAS NSYNPMYFDP NTQYKLPKKV TLSNGQIQVQ DYSKPSFTAA 120
  121 WRNGFTQEGR VNLSRDYRPT VQYQGGSGAG TESSIDWYGA PAFYYQYSGG RGCSLTTSSC 180
  181 YTRVEISGAA QQQNFANWYS FYRTRALATQ TAANLAFYSL PENARISWQL LNSSSCLIGS 240
  241 GSSNCYNNYL RDFTGQHRVN FFNWLENLSV GGGTPLRQAM TRAGEFLKKT GVNGPYAYRP 300
  301 GTQTSPEYSC RGSYHILMTD GLWNNDSASV GNADSTSRSL PDGKSYSSQT PYRDAASNTL 360
  361 ADQAFHYWAT DARPDIDDNI KPYIPYPDQA NPSAEYWNPR NDPATWQHMV TYTLGLGLTT 420
  421 SLTSPKWEGS TYSGGYDEIA AGRLSWPNAS NNHSNNVYDL WHAAVNSRGE FFSADSPDQL 480
  481 VAAFQDILNR ISGKDLPASR PAISSSLQED DTGDKLTRFA YQTSFASDKN WAGDLTRYSL 540
  541 TTQDKATVQT KLWSAQSILD AMPNGGAGRK IMMAGSGTSG LKEFTWGSLS ADQQRQLNRD 600
  601 PDRNDVADTK GQDRVAFLRG DRSKENSDNF RTRNSILGDI INSSPATVGK AQYLTYLAQP 660
  661 IEPSGNYSTF AEAQKTRAPR VYVGANDGML HGFDTDGNET FAFIPSAVFE KLHKLTARGY 720
  721 QGGAHQFYVD GSPVVADAFF GGAWHTVLIG SLRAGGKGLF ALDVTDPANI KLLWEIGVDQ 780
  781 EPDLGYSFPK PTVARLHNGK WAVVTGNGYS SLNDKAALLI IDLETGAITR KLEVTGRTGV 840
  841 PNGLSSPRLA DNNSDGVADY AYAGDLQGNL WRFDLIAGKV NQDDPFSRAN DGPAVASSFR 900
  901 VSFGGQPLYS AVDSAGAAQA ITAAPSLVRH PTRKGYIVIF GTGKYFENAD ARADTSRAQT 960
  961 LYGIWDQQTK GEAAGSTPRL TRGNLQQQTL DLQADSTFAS TARTIRIASQ NPVNWLNNDG1020
 1021 STKQSGWYLD FMVNGTLKGE MLIEDMIAIG QVVLLQTITP NDDPCADGAS NWTYGLDPYT1080
 1081 GGRTSFTVFD LARQGVVDSK SDYSYNKQNV AVSGTEQKGL GGLTLSTNEQ GNPEVCSSGE1140
 1141 CLTVNPGPNT RGRQNWRPIE GKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle