YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148654781, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRRFGAHM SISGGLHTAC ERGRCAGCDV VQIFSKNQQQ WRARPLTDEE IARFKEAQVT  60
   61 EGVPVVMVHD SYLINLAAPG DELWHKSIAA FREELERCAL LGIPCLVTHP GAHVGSGEDA 120
  121 GLRRVAAALD LVFETGVGRD VIVLLETTAG QGSSLGRRFE ELARIIEYSR HPERLGVCVD 180
  181 TCHIFAAGYD IRTPESYAAT IEELDRVIGI ARVKAFHLND SQKELGSRVD RHTHIGEGCI 240
  241 GLEGFRALVN DERFAGLPMV LETPKGDDLA DDVRNLATLR SLCNGQSEHD NER

Type	Start	End	Confidence
Signal Peptide	1	18	0.52
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	293	0.99