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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106891559, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEILEIVLET VLRALRDPIW QGVGVIISIL LILAQIHPER AKVFISTSIV ILIGVFIAQF  60
   61 FVGGNGKNLD EPNATPLPRT MIVSSPAPMS TSPPYPQPVQ SISVENAARV AQLARWGRGR 120
  121 VENLAFSPDG RLLAVATGIG LYLYDIPALS EVRFIATDAA VFDIAFSPDG RLLASGSPDK 180
  181 TVRLWDAASG RLVRTLKGHG DSVFSVAFAP DGRLLASGSP DKTVRLWDVA SGQLVRTLEG 240
  241 HTDWVFSVAF APDGRLLASG SLDKTVRLWD AASGQLVRAL EGHTDSVLSV AFAPDGRLLA 300
  301 SGSPDKTVRL WDAASGQLVR TLEGHTNWVR SVAFAPDGRL LASGSSDKTV RLWDAASGQL 360
  361 VRTLEGHTSD VNSVAFSPDG RLLASASADG TIRLRDAASG QRVSALEGHT DIVAGLSISP 420
  421 DGRLLASAAW DSVISLQEAA TGRRVRALEG HTDAVFSVAF APDGRLLASG ARDSTVRLWD 480
  481 AASGQLLRTL KGHGSSHGSS VWSVAFSPDG RLLASGSLDN TIRLWDAASG QLVRTLEGHT 540
  541 SDVNSVAFSP DGRLLASGAR DSTVRLWDVA SGQLLRTLEG HTDWVNSVAF SPDGRLLASG 600
  601 SPDKTVRLWD AASGQLVRTL EGHTGRVLSV AFSPDGRLLA SGGRDWTVRL WDVQTGQLVR 660
  661 TLEGHTNLVS SVVFSPDGRL LASGSDDGTI RLWGVP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle