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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148654385, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIWFFSVVP RAGAGLDDPW LTALLLAYPV GDLIVLFGVV HIALKSDNWR SALPMHMFSL  60
   61 GLLAFLAGDL GYSSMMMSET YQEGMWPSSL WIVAYTIFAV AAQLQLTSQA APARQSATDG 120
  121 ATTASLNLLP YLGIVVGFGL LLAVTIQNWT RPLGDLIIGA LALTVIVMVR QVVAMRENVR 180
  181 LATERAAAEH ASQIKSEFLA NMSHELRTPL NSIINFTRII STGARGPVTP EQIDYLNRVR 240
  241 QSGEHLLGLI NDILDLSKIE AGRMELFRES FQIGDLIQSV LATASGLVKE KPIELRSEIA 300
  301 PHLPPVYADR TRVRQVLLNL LSNAAKFTDA GTITVHAEGC NGEIVIHVSD TGIGIAPEHL 360
  361 EKIFEAFRQL DNASNRRYEG TGLGLAICRR LVDLHGGRLW VESAVGVGST FSFSLPLTAA 420
  421 TQSASSPESS QTYEPSGAIP IIVIDDDPAA IEIVRTYLSC DGYSVVAVTD SRHAIAEVRR 480
  481 IKPAAIILDV LMPHRDGWEI LADLKADSEL QAIPVALYTI VEQQRLGFHL GASAYLIKPI 540
  541 DEMQLRATVA HLVQKNASIV VIDDDRNQLE IIATCLNRAG AYQVHTANSG AQGWAEIVRR 600
  601 RPDLIILDLM MPEIDGFTIL KRLETDPHTR HIPVVVLSAK DLTIQERAYL AQRVKALLAK 660
  661 GDTSPEHLLN RVMELLNARN AMDVSAN

YRC Informatics Platform - Version 3.0
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