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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106771088, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDTLPQLS EREREILRLV ATGATNQQIA AQLNISANTV KVHLRNIFGK IGVASRTEAT  60
   61 MYAVRNGLLD IDIEKEPSLV ASSPPASQSD TSQETTSEQA VAANGISTSF SSPEPTRDIR 120
  121 HSLPGALLRG GVVGFIIIVA ILATFIAIER NNRPEPTSIV QPSGIAPPPI ESRWRLLAPL 180
  181 PSPQAGFALV TYSYEGRQYL YAIGGETPAG VSNAVLRFDI QTNTWVRLSS KPVAVTDVHA 240
  241 VVVGDRLYVP GGRTASGTIS NQLDVYEPRR DRWITLAPLP APRSGYALAT VEGKIYLFGG 300
  301 WDGQSYRADV WQYNPDNDTW TERTPLTKPR AFASAATVED RIYIIGGEDE SGPLTLNEIY 360
  361 TASDDVQQSD PWSTRSPLPE ARRHLAAVTA SGFIFVVGGS DIESSALIYN VNLDAWEPLL 420
  421 LPIAPRLRDA RVQALNNYIY ITGGSDQNGA VDHVYAYQAF YSVFLPLVPN D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle