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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148658697, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSWKRLSAP VAGVVLITLL TLFAPARSVM MQSSLTFTQT KLLAADAAQY NYFGLSVAVR  60
   61 GDTAIVGAYG KSDLVRNAGA AYAFTRNAGS WTQQARLGTS SPLIDAYLGA TVATNGSYTA 120
  121 AGAPYASVGA QNDGVVYLFS NATWQQQTIL LPNDPDSLSQ FGNALAINDN TLFVGAPMHD 180
  181 SFGVNAGAVY VFTFDGASWV QQQKLIGVDT APGDRFGSAL ALNDGWLAVS APLHSSPGSP 240
  241 GGAVYLFEFD GVSWVQRYKV GAPDTIAGDR FGSAIALDDG WLAVGVPLHR FVGSASGAVY 300
  301 LFEFNGTAWV QRQKFVASDT AGSDQFGSAL ALENRRLVVG APLHNSNGPA SGAVYIFERA 360
  361 TTTWIERAKL IGSDTNAGDR LGGSISIDGN TILVGAYGDT AAGPATGAAY VFVEVTGPGV 420
  421 TTTPSIIVTP TETSTPSATP SNTPSPTFTS TPSATPSNTP SPTFTSTPSP TPSATPTFTS 480
  481 TPSPTPSATP TFTSTPSPTP SATPTFTSTP SPTPSATPTF TSTPSPTPSA TPTFTSTPSP 540
  541 TPSATPTFTS TPSPTPSATP TFTSTPSPTP SATPTFTSTP LPTPSATPTF TSTPSPTPSA 600
  601 TPTFTSTPSP TPSATPSNTP SATPSNTPTA TATVPPGTGT PRPILACVAR RSPASYVAIF 660
  661 GYEMEGTAPV HMPVGGENRF NRYREDLGQP TTFEPGTRRA AFAVVFDGLP LTWSLAGRQV 720
  721 TAWANYPIRC SSDAVVRIQP ILECTLPDSN GTTIARFGYR NDNAFNVAVP VRWQNFFVPA 780
  781 PIQRGQPVVF APGRHRFVFE TGFSRGALVW FLDGRIAVAT NAPVQACQFN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle