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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160427679, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQESNVTPK VPQRQRGPMG GGPMGGMGMG GEKAKNFKGS LKKLMSYLAP FRIQIFVVIV  60
   61 FAAISTVFTI VGPKILAKAT DELTSGIMGK ITGKGGEIDF SYIATIMLWL VFLYVISAIF 120
  121 SYMQGHLMSG VSTNIAYNLR NAIMKKMNKL PFSYYNKTSH GEVLSRITND VDTLNMTLNQ 180
  181 SITQLITSVT SVLGVLIMML SISWKLTIIA VLILPLSVLL IIGVVKKSQK YFKGQQKYLG 240
  241 RVNGHIEEMY GGHLVVKAFN GEEKSLEKFD QENEKLYESA WKSNFLSGLM MPIMNFVGNL 300
  301 GYVLICIVGA SMAAGGTMTI GGIQAFIQYV RSFTQPISQI ANISNQIQQM VAAAERVFEF 360
  361 LDENEESKDV VKVTMDDIDL KGDVTFDHVR FGYEDTDQIV IKDFSVKVKA GQKVAIVGPT 420
  421 GAGKTTLVKL LMRFHDINSG DIYVDGYNTK DFSRSDLRTE FGMVLQDTWL YNGTIMDNIR 480
  481 YGKLDATDEE VIKAAKAAQV DHFVRTLPDG YQMVLNEEAS NISQGQKQLL TIARAILADS 540
  541 KILILDEATS SVDTRTEVLI QKAMDNLMKG RTSFIIAHRL STIRNADIIL CMKDGDIVEQ 600
  601 GNHDELMKLG GFYANLYNSQ FEKLPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle