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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|160430669, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRRMKMRK SKLVVLGLIA ALALTGCGSK AKEEPKTSPD TDATATAIPS GTFTGEGEGK  60
   61 GGKIKVELTL ENGEIKKIDV LENNETQGFA DAMQTITDAM IGTNSFDVDS VSGATLTSTG 120
  121 FKTAVENAFE KTGASKDQLV AKEAAGTSNK EEREAAYTAD VVIVGAGGAG LTAAIEAANN 180
  181 GASVILLEKM PMEGGNTLIS GGEYAAPGNW LQKEEGIEDS KDQFYEDILK GGDYENDPEL 240
  241 VRVLADHALE SAEWLKDEVN VTFEDYMLFF GGHSVKRSLV PKDASGVELI SKLTKKAGEV 300
  301 GVITHLNTTA KELVVENDKV VAVKAEFDGK EITYSANKGV ILATGGFGSN LEMRVKYNPE 360
  361 MNEKILSTNS VGSTGDGITM AENVGAELVD MQYIQTYPTC DPELGTLLYV GDVRMEGRSI 420
  421 LVNKEGKRFV EELERRDVIS RAVVAQTGGV SYMFWDEASM VASGVNVKHQ REYDYLIEKG 480
  481 ILIKADTIEE AAAFFDIDAE ELKKTVEKYN EYAKNGKDEE FNKRGTLTAF TGGPYYIMKS 540
  541 KPAIHHTMGG IKINTDANVI NTDGNIIKGL FAAGEVTGDI HGTNRLGSDA IADITVFGRI 600
  601 AGRNAAKAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle