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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119864307, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKLNKEQD QLNDPVCDMS VSHDSKHTYD YADKQYLFCS EHCLKKFKEQ PEQYLDKETS  60
   61 PPSKTEGESK TYTCPMHPEI QQHDPGTCPK CGMALETIGV SATATATTYT CPMHPDVTQD 120
  121 SPGNCPKCGM ALEGETSGGE QKNEELIDMS RRFWGCTALA LPVFFLAMTA DMLPGWLPNW 180
  181 LSLQMVQWIE CALATPVVVW GGWPFFVRGW QSVRTWNLNM FTLIALGVSV SWSYSMVALL 240
  241 LPGLFPTIMQ MSDGLVPVYF EAAAMITTLV LLGQVLELRA RSRTNAAIEM LLSLAPNTAR 300
  301 IVREDGTEED IPLDQVQSGA TLRVRPGDKV PVDGTVIEGD SNIDESMVTG ESLPVTKSAG 360
  361 EKLIGATVNG TGSLLMRAEK VGSDTLLAQI VDMVAKAQRT RAPIQKLADL VAGYFVPAIV 420
  421 GCAVLTFAVW FGWGPEPRLA HAVVNAVAVL IIACPCALGL ATPISIMVGT GRGATAGVLI 480
  481 KNAEALEIME KVDTLVVDKT GTLTEGKPKL VAVQAEEGFD EDQLVRLVAS LERASEHPLA 540
  541 EAIVRGAEEK GIKLVKADNF KSLTGKGVTG EVDGESVAAG NVALMESLGI NVENLSQQAD 600
  601 QQRAEGQTVM LIAINGKAAG LIGVADPIKE STAEAIRDLH GEGIKIVMIT GDNQITAKAV 660
  661 AGKLEIDQVH AEVLPEEKAT LIKKLQAEGH IVAMAGDGIN DAPALAQAHV GIAMGTGTDV 720
  721 AIESASITLV KGDLRGIVRA RRLSRATMRN IRQNLFFAFF YNSAGVPIAA GVLFPFFGIL 780
  781 LSPMIAAAAM SFSSVSVISN SLRLKRVKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle