YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106883388, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTIMLIPI GSGVGVTSVS LGMVRALERQ GVAVNFFKPI AQPRSGDVGP ERSTATLRNA  60
   61 SALNPPEPFA MKYAENLISS SRTSELLENI VERFRQGTKE SDVIIVEGLV PTDKHQFANE 120
  121 INYSIAKALG AEMVFVTHPN NDTSQQLKER IEIAVSSFGG KNNQRIAGCI INKVGAPSDE 180
  181 SEQYRPDLTE MFEGAHDSLN SNLEVLQMFS KSPLPILGCI PWSSELIAPR VVDLATHLHA 240
  241 KILNKGDLNT RRLQRVTFCA RSIPNMLEHF KAGSMLVTSG DRSDVIIAAC LAVMNGMKIG 300
  301 CLLLTGDYTP EAEVMKLCAR AMESGLPILL INSNTWQTAQ RLQNFNMEIP VDDIERIEKV 360
  361 QEYIAGHVDK HWLKTLTGDS SLSRRLSPPA FRYHLTELAR KNSQRIVLPE GEEPRTIQAA 420
  421 LICAQRGIAK PVLLGNPEEI HRVATQQGIV LTDDVEIINP DDVIEDYVAP MVELRKSKGL 480
  481 TEVVAREQLR DTVVLGTMML AEGEVSGLVS GALNTTANTI RPALQLIKTA PGANLVSSIF 540
  541 FMLLPDQVLV YGDCAINPDP SAEQLADIAI QSADSAIAFG IDPKVAMISY STGTSGVGSD 600
  601 VDKVREATKI AQQRRPDLLI DGPLQYDAAV MENVAKSKAP DSPVAGKATV FIFPDLNTGN 660
  661 TTYKAVQRSA NLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAT QAMDKAIANV 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle