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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106762671, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCQQQQVNA EYPMIKIKEL TRLYQINKTV IEYGLIELLP KEHVPLAYRF MCACLFWISN  60
   61 KHQGMSLPER LRLSLQSLGP IYIKLGQMLS TRRDLLPPIY ADQLAYLQDN VPPFCGEQAI 120
  121 EQIEKSFNKP IDSIFDDFDK VALASASIAQ VHTATLKEDG RAVVVKVTRP GIEKRIQADL 180
  181 QLMKWLASLM QRFLKEAERL RPVEVIHEYE KTIIDEIDLM REGANTIQLR RNFLNSKLLY 240
  241 VPEIYPNYCT KNALVMERIY GIPVSDTNAL QAQNTNLKLL AERGVETFFT QVFRDSFFHA 300
  301 DMHPGNVFVS YEHPEDPLWI GIDCGIMGTL NKEDKRYLAE NFLAFFNRDY RQVAQLHVDS 360
  361 GWVPADTPVE EFEFSIRAVC EPIFEKPLAE ISFAQVLINL FNTARRYNMK VQPQLVLLQK 420
  421 TLFYVEGLGR QLYPQLDLWD TAKPFLENWM KEQVSPKTLF KSISQKAPFW LEKLPELPEL 480
  481 VYYNLSQAKS QNKQLILLAE SFNKQQKNNR KSYFYIAAAI SLSLISALAY LQTDKNLTLL 540
  541 AGIPGIFAWL LAWRYTNKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle