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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119863313, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLESKRKYN FILVTILLFL SYPLLRSIEW HGSTHLHTFM EIIATLLALF VGILSFIHYH  60
   61 TNKSNQLFLL IAVGFFGTAF LDGYHAIVTS LFFAEYFPSI PSSLIPWSWI ASRLFLSIFL 120
  121 FWSYIHFRYM HSTTINERHL YTFASLSTLT TFLFFAFVPL SNAYNTEFIF HRMAEWVPGL 180
  181 FFSLALCGYL VKGNWKKDIF EYWLTLSLIV SVISQIVFMS SSEVLFDIEF DAAHLLKKIS 240
  241 YILVLIGLLK SIYKLVLYGV IQRAELIKQT YKLKRYQRIA GLGSYLLNFK TGIWTSSEIL 300
  301 DELFGIDQSY NHSTEGWTLI VHPDDRIKMD DYLKNEVLAK GKPFDKEYRI VRQTDQSIRW 360
  361 LHGLGKLEFD NDGLPVKMVG TVQDITEQKR ASDSLLKLSL AVEQSPNSIV ITDLDGKIEY 420
  421 VNNMFIKVTG YSRDEVLGQN PRILKSGKTP QTTFKEMWAH LTRGDIWHGE IINRRKDKSI 480
  481 YIESATITPV KQADGKITNY VAIKEDITEK KKAEAYTENL AYFDQLTGLP NRRMLQAQVK 540
  541 YRLNMAQSNH QPLTVMFLDL DNFKNINDSL GHTVGDQVLI KIAKRIKKAI REVDTVSRLG 600
  601 GDEFIMLFPN TDANAAMHIA TTLIQEISKA SVVEHNELTI TPSIGIAIYP NDGNDFKTLL 660
  661 KNAETAMYRV KNDSRNGFHF VTPEMQLSAS RNLQLENALR HALKRNELQL YYQPQISTSN 720
  721 GQIIGAEALL RWHHPELGMI SPAEFIPIAE SSGQIIEIGE WVLRTAIRQT KNWMDDGFTP 780
  781 MIIAVNLSVV QFRQKNLLTL ITDILAEVQL PNEYLELELT EAVTMHDPES VINVMNTFHE 840
  841 QGIRMSIDDF GTGYSSLSYL KKFKVYKLKI DQSFIRDISN DPDDRAIVSA IIDMASNLGL 900
  901 QTIAEGVETA EQLAFLRLHG CHEVQGYYFS KPLPSVEFEQ FRHNHDLTSP PLNQQADFEG 960
  961 DY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle