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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|106881934, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIANQKIVKA RRTYNKLVAN EMMEDFALRF TARRARKWSL NRISVTALGT VSFLVLEAIG  60
   61 GAITLNYGFE NSAWAILAVT FIIFFTGLPI SYYAAKYGVD IDLLSRGAGF GYIGSTIASL 120
  121 IYASFTFIFF ALEASIMSMA LQMLFGLPLS IGYIISALLV LPLVTHGITY ISRFQVWTQP 180
  181 LWIALQLLPL FFVFTHADSQ LDAWVNFTGK VGESGGSFNL LLFGAASAVL LSLVAQIGEQ 240
  241 VDFLRFLPEK PQQGAWRWWL ALIAGGPGWI FFGALKLFLG SFLAYFALQQ GIASDLAGDP 300
  301 AHMYQLAYGY VFANPQISMI VACTFVVISQ LKINVANAYA GSLAWSNFFS RVTLTHPGRV 360
  361 VWMLFNVAIA LLLMELGIYQ AIASMLSVYS VLVLAWLSSV VADLVINKPL GISPKHIEFK 420
  421 RSHLYDINPV GVGSMLIASL AGFSAHLGWY GETIKALASF IACFLPFITV PLIGWLTQGK 480
  481 YYLVASDRTP IHKITKCHIC ENAFDPEDMT FCPAYGKAIC SLCCSLDVRC GDKCRPNATL 540
  541 SQQTHDFFSR FLSAQLLRKL ASPLSQFLAL TFTLSFLSAG ILFLIYQQVP LDDPRVKQVF 600
  601 ASTLVKIFFL LLIIIGVVSW LFILVRSGNQ TALKELRSQT NALAKESNAH EQTSSALQVA 660
  661 KEVAEAANEA KSRYLAGLSH ELRTPLNVLL GYAQLLSRDP ALPFKQREII GIVKRNGEHL 720
  721 ADLIEGLLEI SKIEAGRVNL QRDEFNLKAI LQQLVDMFQM QASKKRLKFY YLASPNLPDY 780
  781 VATDKQRLRQ ILINLISNAI KYTEQGSVTF KVTYRSEVAH FSVIDTGPGI SKSNQELIFK 840
  841 PFEQIRNDHT KAISGTGLGL TISRSLAELM GGEISLTSSI GQGSTFNFRL MLFKLHKDPK 900
  901 EPEFNKLQAT GYSGKKQTLL VVDDELNQRA LMSDLLKPIG FDVLLAENAQ QGFTLLEDED 960
  961 VDLILLDVRM PQMNGWEMVK LLRERHYAMP VLMVSANARD AEYNLQAEGY HSGYIAKPVN1020
 1021 LDALLGKIAQ LLNLHWRYKE SEKNQTPALS RPDKPGVPRE QYQALIALAE IGYLSGFKDK1080
 1081 FAEIESQYCY PQASASQIKE YVEVCDFPKI IEYLSELNHE A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle