YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|106764139, gi...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSHSNVSM HPLPERESLI KLDFTQFAIF YLHRMELIMK KVIGLAAAIG LMASSLTYAN  60
   61 TTITVSGSTS VTNVMEVIAE TYSKETGIDV EVQGTGSSAG VRAANDGTSM IGMASREVAR 120
  121 KEVTADTDLI VMARDGIAVT VNNSNTVKSL TKDEIAKIYR GETKNWKEVG GEDKPIVVVT 180
  181 RDTASGTRAA FEDILKLTRK INGMKVSTIS QTAQVANGNG MVKTIVANND FAIGFISLGS 240
  241 VDSSLTALAV DGVAATDPNI VANKYKIARP FVLLVKKDPA KETRDFINYI LSDAGQKIVA 300
  301 TEGYIRVN

Type	Start	End	Confidence
Cytoplasmic	1	41	0.86
Transmembrane Helix	42	60	0.86
Non-Cytoplasmic	61	308	0.98