YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|106763668, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLMLTDKR WEMLLHLMKS TGRIYNKPEH RNTFEGILYR LRTGIPWRDL PKEFGGWSSI  60
   61 FRRFNLWSKK GILSYLFKEL AKDSDFDWVF IDGSIIRAHQ HSTGAATTDS ECIGKSRGGN 120
  121 ATKIYLAVDS NGFPIYFELS EGQRNDITHA QSLVEHTCQA KIVIADKGYD SDIFRAFIES 180
  181 EGMESVIPKR KYNGEKQKDV DWCLYKYRHL VENAFGRIKH FRSISTRYDK LARNYASMVS 240
  241 LAFMMMWLPM YC

Type	Start	End	Confidence
Cytoplasmic	1	230	0.78
Transmembrane Helix	231	251	0.78
Non-Cytoplasmic	252	252	0.94