YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|106880773, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISKVPSNPK LLLILSSAKL PQSLIMRLLK TTIHPDIASL NKSTFLRNAA RAIVLKGDMI  60
   61 LMLYTARYHD YTLPGGGVDK EEGLVEGLVR ELQEETGAQN IRGIQAFGLY EEFRPWHKDG 120
  121 FEIMHMKSYC YICDIDTKLG VTNYEDYEIR NGMKPVWLNI YDAIKHNQQT LLNSDKKGLS 180
  181 VERETFLLQL IAAELLAEKQ QVNAN

Type	Start	End	Confidence
Signal Peptide	1	23	0.60
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	205	0.99