YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94492161, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRLLKNYS LYFAWLTALI ATLGSLYLSL VRHIPVCDLC WYQRVCIYPL TILLGIAAYR  60
   61 TDRGVVKYAL PLVVLGFLFS VYQYLQQMIP GFAPINLCGS TSPHCSEIHW EIFGFITLPF 120
  121 LGMLATLIMS FFLIMAFYSL DKRLAN

Type	Start	End	Confidence
Cytoplasmic	1	10	0.89
Transmembrane Helix	11	31	0.95
Non-Cytoplasmic	32	39	0.83
Transmembrane Helix	40	59	0.92
Cytoplasmic	60	65	0.82
Transmembrane Helix	66	85	0.92
Non-Cytoplasmic	86	115	0.91
Transmembrane Helix	116	138	0.91
Cytoplasmic	139	146	0.88