YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|154706732, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAEPTLWSF VAHASLIVKM VIFLLFLASI ASWSIIIQRV FFVKRTRREM KKFEHLFWSG  60
   61 VDLTTLYNRL SEKKDKLIGM SSIFYAGFNE FTRLRQELGS NPKAILEGTH RAMRIAQSRE 120
  121 ADLLERNLSF LATVGSTSPY VGLFGTVWGI MTSFRALGAV QQVTIAMVAP GISEALIATA 180
  181 VGLFAAIPAV IAYNRFSNEL NAITQNYDTF QEEILNILHR RVYKYKLEEA NAKATVS

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.85
Transmembrane Helix	20	42	0.91
Cytoplasmic	43	127	0.98
Transmembrane Helix	128	151	0.82
Non-Cytoplasmic	152	170	0.75
Transmembrane Helix	171	193	0.84
Cytoplasmic	194	237	0.95