YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|93279980
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHMVNGKVA LVTGAAQGIG RAFAEALLLK GAKVALVDWN LEAGVQCKAA LHEQFEPQKT  60
   61 LFIQCDVADQ QQLRDTFRKV VDHFGRLDIL VNNAGVNNEK NWEKTLQINL VSVISGTYLG 120
  121 LDYMSKQNGG EGGIIINMSS LAGLMPVAQQ PVYCASKHGI VGFTRSAALA ANLMNSGVRL 180
  181 NAICPGFVNT AILESIEKEE NMGQYIEYKD HIKDMIKYYG ILDPPLIANG LITLIEDDAL 240
  241 NGAIMKITTS KGIHFQDYGS KENLYFQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.86
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	267	0.99