YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114197816, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYSLVFC LLVLEMAVFM GLIVPLPFTI KRKLFTFISE SPIVAKLQYG LKITFIFILI  60
   61 LFIDSVNRVY RVQLEVAAFH KEGGGMGATI GTDRMEVQAR KFYSQRNMYL CGFTLFLSLI 120
  121 LNRTYTMILE VLRLEEKVKL LEGDKKAGGK DSARLAQAGD MGEIGRLKKE LEAKDRDIET 180
  181 LKKQCEGLTR EYHSLGDKVS GKSDDDSKKD L

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.56
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	48	0.56
Transmembrane Helix	49	66	0.77
Non-Cytoplasmic	67	211	0.53